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USC-OGP 2-DE database

Two-dimensional polyacrylamide gel electrophoresis database


USC-OGP 2-DE database 
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Searching in 'USC-OGP 2-DE database' for entry matching: PIPNB_HUMAN




USC-OGP 2-DE database:  PIPNB_HUMAN


PIPNB_HUMAN


General information about the entry
View entry in simple text format
Entry namePIPNB_HUMAN
Primary accession numberP48739
integrated into USC-OGP 2-DE database on January 17, 2017 (release 1)
2D Annotations were last modified onJanuary 17, 2017 (version 1)
General Annotations were last modified on April 5, 2017 (version 2)
Name and origin of the protein
DescriptionRecName: Full=Phosphatidylinositol transfer protein beta isoform; Short=PI-TP-beta; Short=PtdIns transfer protein beta; Short=PtdInsTP beta;.
Gene nameName=PITPNB
Annotated speciesHomo sapiens (Human) [TaxID: 9606]
TaxonomyEukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo.
References
[1]   2D GEL CHARACTERIZATION
Author 1., Author 2.
Submitted (Mar-2011) to Current
2D PAGE maps for identified proteins
How to interpret a protein

UVEAL_MELANOMA_3-10 {UVEAL MELANOMA 3-10}
Homo sapiens (Human)
UVEAL_MELANOMA_3-10
  map experimental info
 
UVEAL_MELANOMA_3-10

MAP LOCATIONS:
pI=6.48; Mw=32038

Cross-references
UniProtKB/Swiss-ProtP48739; PIPNB_HUMAN.



2D PAGE maps for identified proteins
  • How to interpret a protein map
  • You may obtain an estimated location of the protein on various 2D PAGE maps, provided the whole amino acid sequence is known. The estimation is obtained according to the computed protein's pI and Mw.
  • Warning 1: the displayed region reflects an area around the theoretical pI and molecular weight of the protein and is only provided for the user's information. It should be used with caution, as the experimental and theoretical positions of a protein may differ significantly.
  • Warning 2: the 2D PAGE map is built on demand. This may take some few seconds to be computed.



External data extracted from UniProtKB/Swiss-Prot
Extracted from UniProtKB/Swiss-Prot, release: 0.0
Entry namePIPNB_HUMAN
Primary accession numberP48739
Secondary accession number(s) B3KYB8 B7Z7Q0 Q8N5W1
Sequence was last modified on January 23, 2007 (version 2)
Annotations were last modified on March 15, 2017 (version 148)
Name and origin of the protein
DescriptionRecName: Full=Phosphatidylinositol transfer protein beta isoform; Short=PI-TP-beta; Short=PtdIns transfer protein beta; Short=PtdInsTP beta;
Gene nameName=PITPNB
Encoded onName=PITPNB
KeywordsAcetylation; Alternative splicing; Complete proteome; Cytoplasm; Golgi apparatus; Lipid-binding; Phosphoprotein; Reference proteome; Transport.
Copyright
Copyrighted by the UniProt Consortium, see http://www.uniprot.org/help/license. Distributed under the Creative Commons Attribution-NoDerivs License
Cross-references
EMBLD30037; BAA06277.1; -; mRNA
EMBLCR456541; CAG30427.1; -; mRNA
EMBLAK302367; BAH13686.1; -; mRNA
EMBLAL031591; CAB63033.1; -; Genomic_DNA
EMBLAL031591; CAQ68296.1; -; Genomic_DNA
EMBLCH471095; EAW59743.1; -; Genomic_DNA
EMBLBC018704; AAH18704.1; -; mRNA
EMBLBC031427; AAH31427.1; -; mRNA
CCDSCCDS13842.1; -. [P48739-1]; .
CCDSCCDS63432.1; -. [P48739-3]; .
CCDSCCDS63433.1; -. [P48739-2]; .
RefSeqNP_001271206.1; NM_001284277.1. [P48739-2]; .
RefSeqNP_001271207.1; NM_001284278.1. [P48739-3]; .
RefSeqNP_036531.1; NM_012399.4. [P48739-1]; .
UniGeneHs.705323; -; .
ProteinModelPortalP48739; -; .
SMRP48739; -; .
BioGrid117261; 24; .
IntActP48739; 2; .
MINTMINT-5002601; -; .
STRING9606.ENSP00000334738; -; .
SwissLipidsSLP:000000416; -; .
iPTMnetP48739; -; .
PhosphoSitePlusP48739; -; .
DMDM1346772; -; .
EPDP48739; -; .
MaxQBP48739; -; .
PaxDbP48739; -; .
PeptideAtlasP48739; -; .
PRIDEP48739; -; .
DNASU23760; -; .
EnsemblENST00000320996; ENSP00000321266; ENSG00000180957. [P48739-2]; .
EnsemblENST00000335272; ENSP00000334738; ENSG00000180957. [P48739-1]; .
EnsemblENST00000634017; ENSP00000487693; ENSG00000180957. [P48739-3]; .
GeneID23760; -; .
KEGGhsa:23760; -; .
UCSCuc003adk.5; human. [P48739-1]; .
CTD23760; -; .
GeneCardsPITPNB; -; .
HGNCHGNC:9002; PITPNB; .
HPAHPA000528; -; .
MIM606876; gene; .
neXtProtNX_P48739; -; .
OpenTargetsENSG00000180957; -; .
PharmGKBPA33336; -; .
eggNOGKOG3668; Eukaryota; .
eggNOGCOG5083; LUCA; .
GeneTreeENSGT00760000119216; -; .
HOGENOMHOG000006717; -; .
HOVERGENHBG058915; -; .
InParanoidP48739; -; .
OMARAIEDQT; -; .
OrthoDBEOG091G0CQQ; -; .
PhylomeDBP48739; -; .
TreeFamTF313279; -; .
ReactomeR-HSA-1483196; PI and PC transport between ER and Golgi membranes; .
ChiTaRSPITPNB; human; .
GeneWikiPITPNB; -; .
GenomeRNAi23760; -; .
PROPR:P48739; -; .
ProteomesUP000005640; Chromosome 22; .
BgeeENSG00000180957; -; .
CleanExHS_PITPNB; -; .
ExpressionAtlasP48739; baseline and differential; .
GenevisibleP48739; HS; .
GOGO:0005789; C:endoplasmic reticulum membrane; TAS:Reactome; .
GOGO:0070062; C:extracellular exosome; IDA:UniProtKB; .
GOGO:0000139; C:Golgi membrane; TAS:Reactome; .
GOGO:0008289; F:lipid binding; IEA:UniProtKB-KW; .
GOGO:0006629; P:lipid metabolic process; NAS:ProtInc; .
GOGO:0006997; P:nucleus organization; TAS:BHF-UCL; .
GOGO:0015914; P:phospholipid transport; TAS:Reactome; .
GOGO:0006890; P:retrograde vesicle-mediated transport; Golgi to ER; TAS:BHF-UCL
Gene3D3.30.530.20; -; 1; .
InterProIPR001666; PI_transfer; .
InterProIPR023393; START-like_dom; .
PANTHERPTHR10658; PTHR10658; 1; .
PfamPF02121; IP_trans; 1; .
PRINTSPR00391; PITRANSFER; .



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Database constructed and maintained by Angel Garcia, using the Make2D-DB II package (ver. 3.10.2) from the World-2DPAGE Constellation of the ExPASy web server

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